Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs74371522 chr1:233185052 T/C PRHOXNB chr13:28552243-28562774:- 0.58 7.95 1.52E-10 Box Plot
ACC rs74472709 chr3:116136678 G/A OR6C3 chr12:55725485-55726420:+ 0.96 8.39 3.07E-11 Box Plot
ACC rs7456147 chr7:47182176 A/G DRGX chr10:50572226-50604062:- 0.76 7.9 1.85E-10 Box Plot
ACC rs74562317 chr20:60977259 G/A PRAMEF16 chr1:13495254-13498260:+ 0.62 7.77 2.99E-10 Box Plot
ACC rs74706299 chr1:147354821 G/A PRHOXNB chr13:28552243-28562774:- 0.7 9.5 5.88E-13 Box Plot
ACC rs74712897 chr3:116072086 G/T OR6C3 chr12:55725485-55726420:+ 1.05 8.34 3.71E-11 Box Plot
ACC rs74754540 chr11:61716357 G/A PRHOXNB chr13:28552243-28562774:- 0.65 7.99 1.32E-10 Box Plot
ACC rs74775583 chr1:233191124 A/T PRHOXNB chr13:28552243-28562774:- 0.58 7.95 1.52E-10 Box Plot
ACC rs74840658 chr18:37106603 T/G PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs74866760 chr2:142860919 A/G PRHOXNB chr13:28552243-28562774:- 0.57 7.64 4.79E-10 Box Plot
ACC rs74872635 chr1:116271067 T/C GAGE2D chrX:49207160-49214420:+ 0.69 8.02 1.19E-10 Box Plot
ACC rs74872635 chr1:116271067 T/C TFDP3 chrX:132350697-132352376:- 0.98 8.65 1.23E-11 Box Plot
ACC rs749167 chr1:236177874 C/T PRHOXNB chr13:28552243-28562774:- 0.59 7.83 2.39E-10 Box Plot
ACC rs74927310 chr5:120327659 C/G GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs74940764 chr7:17252376 C/T TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot